BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012H01SP1|AL426427
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1681 1504 0.0
>3x_Contig1681
Length = 11798
Score = 1504 bits (753), Expect = 0.0
Identities = 775/787 (98%)
Strand = Plus / Plus
Query: 3 tccacttcaggccgggccaattttgtccattgttcgaacaatcagatgaatccmacggtg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9833 tccacttcaggccgggccaattttgtccattgttcgaacaatcagatgaatccaacggtg 9892
Query: 63 gaacttctcctgcagaaccagctgatatcaccgggatgaatagcagtccaaatgataacm 122
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 9893 gaacttctcctgcagaaccagctgatatcaccgggatgaatagcagtacaaatgataaca 9952
Query: 123 atgccaatgttaacactacggtacccggcgcgcacggcaaccgtggaggtgtcacaagac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9953 atgccaatgttaacactacggtacccggcgcgcacggcaaccgtggaggtgtcacaagac 10012
Query: 183 tagaggacgggtccttttctgtacagtatttcccagaaacagataaccaagctcctccga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10013 tagaggacgggtccttttctgtacagtatttcccagaaacagataaccaagctcctccga 10072
Query: 243 gctatgaagcgtatcagagagaatctactccagtacaaatgacaagatccttacccacca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10073 gctatgaagcgtatcagagagaatctactccagtacaaatgacaagatccttacccacca 10132
Query: 303 cacccccacaacaactagatgatattctgtccagggaccaaccaccatcttcttcatact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10133 cacccccacaacaactagatgatattctgtccagggaccaaccaccatcttcttcatact 10192
Query: 363 ttgatggcccaccgccatcttggagattgcvagcacctcagccgaacaataattcagtgg 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 10193 ttgatggcccaccgccatcttggagattgcaagcacctcagccgaacaataattcagtgg 10252
Query: 423 cattaaatgccttactaaatacatcgggagatgctggaaatttacaacgacaaagtcgta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10253 cattaaatgccttactaaatacatcgggagatgctggaaatttacaacgacaaagtcgta 10312
Query: 483 attcatcatccaatagacttgctgcactagctgctgcggctgccggtgttgctggcaata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10313 attcatcatccaatagacttgctgcactagctgctgcggctgccggtgttgctggcaata 10372
Query: 543 ctgcsagtggcaatggtaccaacagcggttcctcagctgctggcgccctaggcgtcasmg 602
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10373 ctgcaagtggcaatggtaccaacagcggttcctcagctgctggcgccctaggcgtcagca 10432
Query: 603 cmtatgcctcaagtaacgcagcctcaatgacagatctcctaagtyacctccagaggttac 662
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10433 gcaatgcctcaagtaacgcagcctcaatgacagatctcctaagtcacctccagaggttac 10492
Query: 663 cctcatacgaagagtctagagtccgttacgaaaatgtatcacgtgaacctaccccactat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10493 cctcatacgaagagtctagagtccgttacgaaaatgtatcacgtgaacctaccccactat 10552
Query: 723 acattccatcacaacaataaactcagtaatacaccgtctcaaccctagctcccggtgaac 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10553 acattccatcacaacaataaactcagtaatacaccgtctcaaccctagctcccggtgaac 10612
Query: 783 ctcgtcc 789
|||||||
Sbjct: 10613 ctcgtcc 10619
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3792
Number of Sequences: 1807
Number of extensions: 3792
Number of successful extensions: 106
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)